Lab Member Publications

Prevelige Publications | Lab Member Publications

Braga

• Braga CA, Carvalho D, Lara FA, Cortines JR, Moore SD, Prevelige PE Jr, Foguel D. (2007) An aggregation-prone intermediate species is present in the unfolding pathway of the monomeric portal protein of bacteriophage P22: implications for portal assembly. Biochemistry 46:7353-64.

Cortines

• Braga CA, Carvalho D, Lara FA, Cortines JR, Moore SD, Prevelige PE Jr, Foguel D. (2007) An aggregation-prone intermediate species is present in the unfolding pathway of the monomeric portal protein of bacteriophage P22: implications for portal assembly. Biochemistry 46:7353-64.

Douglas

• Douglas, C. C., D. Thomas, et al. (2004). "Investigation of N-terminal domain charged residues on the assembly and stability of HIV-1 CA." Biochemistry 43: 10435-41.

Fu

• Fu, C. Y., M. C. Morais, et al. (2007) Molecular dissection of o29 scaffolding protein function in an in vitro assembly system. J Mol Biol 366:1161-73.
• Fu, C. Y. and P. E. Prevelige, Jr. (2006). "Dynamic motions of free and bound O29 scaffolding protein identified by hydrogen deuterium exchange mass spectrometry." Protein Sci 15: 731-43.

Kang

• Nemecek D, Gilcrease EB, Kang S, Prevelige PE Jr, Casjens S, Thomas GJ Jr (2007). Subunit conformations and assembly states of a DNA-translocating motor: the terminase of bacteriophage P22. J Mol Biol 374:817-36.
• Kang S, Poliakov A, Sexton J, Renfrow MB, Prevelige PE Jr.(2008) Probing Conserved Helical Modules of Portal Complexes by Mass Spectrometry-based Hydrogen/Deuterium Exchange.
  J Mol Biol. 381:772-84.
• Kang S, Lander GC, Johnson JE, Prevelige PE. (2008) Development of bacteriophage p22 as a platform for molecular display: genetic and chemical modifications of the procapsid exterior surface. Chembiochem 9:514-8.
• Kang, S. and P. E. Prevelige, Jr. (2005). "Domain study of bacteriophage p22 coat protein and characterization of the capsid lattice transformation by hydrogen/deuterium exchange." J Mol Biol 347: 935-48.
• Kang, S., A. M. Hawkridge, et al. (2006). "Identification of subunit-subunit interactions in bacteriophage P22 procapsids by chemical cross-linking and mass spectrometry." J Proteome Res 5: 370-7.

Lanman

• Lanman, J. and P. E. Prevelige, Jr. (2005). "Kinetic and mass spectrometry-based investigation of human immunodeficiency virus type 1 assembly and maturation." Adv Virus Res 64: 285-309.
• Douglas, C. C., D. Thomas, et al. (2004). "Investigation of N-terminal domain charged residues on the assembly and stability of HIV-1 CA." Biochemistry 43: 10435-41.
• Lanman, J., T. T. Lam, et al. (2004). "Key interactions in HIV-1 maturation identified by hydrogen-deuterium exchange." Nat Struct Mol Biol 11: 676-7.
• Lanman, J. and P. E. Prevelige, Jr. (2004). "High-sensitivity mass spectrometry for imaging subunit interactions: hydrogen/deuterium exchange." Curr Opin Struct Biol 14: 181-8.
• Lanman, J., T. T. Lam, et al. (2003). "Identification of novel interactions in HIV-1 capsid protein assembly by high-resolution mass spectrometry." J Mol Biol 325: 759-72.
• Lam, T. T., J. K. Lanman, et al. (2002). "Mapping of protein:protein contact surfaces by hydrogen/deuterium exchange, followed by on-line high-performance liquid chromatography-electrospray ionization Fourier-transform ion-cyclotron-resonance mass analysis." J Chromatogr A 982: 85-95.
• Lanman, J., J. Sexton, et al. (2002). "Kinetic analysis of the role of intersubunit interactions in human immunodeficiency virus type 1 capsid protein assembly in vitro." J Virol 76: 6900-8.
• Lanman, J., R. Tuma, et al. (1999). "Identification and characterization of the domain structure of bacteriophage P22 coat protein." Biochemistry 38: 14614-23.

Moore

• Cingolani, G., S. D. Moore, et al. (2002). "Preliminary crystallographic analysis of the bacteriophage P22 portal protein." J Struct Biol 139: 46-54.
• Moore, S. D. and P. E. Prevelige, Jr. (2002). "DNA packaging: a new class of molecular motors." Curr Biol 12: R96-8.
• Moore, S. D. and P. E. Prevelige, Jr. (2002). "Bacteriophage p22 portal vertex formation in vivo." J Mol Biol 315: 975-94.
• Rodriguez-Casado, A., S. D. Moore, et al. (2001). "Structure of bacteriophage P22 portal protein in relation to assembly: investigation by Raman spectroscopy." Biochemistry 40: 13583-91.
• Moore, S. D. and P. E. Prevelige, Jr. (2001). "Structural transformations accompanying the assembly of bacteriophage P22 portal protein rings in vitro." J Biol Chem 276: 6779-88.

Parker

• Parker, M. H., C. G. Brouillette, et al. (2001). "Kinetic and calorimetric evidence for two distinct scaffolding protein binding populations within the bacteriophage P22 procapsid." Biochemistry 40: 8962-70.
• Sun, Y., M. H. Parker, et al. (2000). "Structure of the coat protein-binding domain of the scaffolding protein from a double-stranded DNA virus." J Mol Biol 297: 1195-202.
• Parker, M. H. and P. E. Prevelige, Jr. (1998). "Electrostatic interactions drive scaffolding/coat protein binding and procapsid maturation in bacteriophage P22." Virology 250: 337-49.
• Tuma, R., M. H. Parker, et al. (1998). "A helical coat protein recognition domain of the bacteriophage P22 scaffolding protein." J Mol Biol 281: 81-94.
• Parker, M. H., S. Casjens, et al. (1998). "Functional domains of bacteriophage P22 scaffolding protein." J Mol Biol 281: 69-79.
• Parker, M. H., M. Jablonsky, et al. (1997). "Cloning, purification, and preliminary characterization by circular dichroism and NMR of a carboxyl-terminal domain of the bacteriophage P22 scaffolding protein." Protein Sci 6: 1583-6.
• Parker, M. H., W. F. Stafford, 3rd, et al. (1997). "Bacteriophage P22 scaffolding protein forms oligomers in solution." J Mol Biol 268: 655-65.

Poliakov

• Chang JR, Poliakov A, Prevelige PE, Mobley JA, Dokland T. (2008)  Incorporation of scaffolding protein gpO in bacteriophages P2 and P4. Virology. 370:352-61.
• Poliakov A, Jardine P, Prevelige PE. (2008) Hydrogen/deuterium exchange on protein solutions containing nucleic acids: utility of protamine sulfate. Rapid Commun Mass Spectrom.22:2423-28.
• Poliakov, A., E. van Duijn, et al. (2007) Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies. J Struct Biol 157: 371-83.
• Lander, G. C., L. Tang, et al. (2006). "The structure of an infectious P22 virion shows the signal for headful DNA packaging." Science 312: 1791-5.

Tuma

• Tuma, R, Tsuruta, H, French, KH, Prevelige, PE. (2008) "Detection of intermediates and kinetic control during assembly of bacteriophage P22 procapsid." J Mol Biol 381:1395-1406.
• Tuma, R., L. U. Coward, et al. (2001). "Hydrogen-deuterium exchange as a probe of folding and assembly in viral capsids." J Mol Biol 306: 389-96.
• Tuma, R., H. Tsuruta, et al. (2001). "Characterization of subunit structural changes accompanying assembly of the bacteriophage P22 procapsid." Biochemistry 40: 665-74.
• Lanman, J., R. Tuma, et al. (1999). "Identification and characterization of the domain structure of bacteriophage P22 coat protein." Biochemistry 38: 14614-23.
• de Sousa, P. C., Jr., R. Tuma, et al. (1999). "Cavity defects in the procapsid of bacteriophage P22 and the mechanism of capsid maturation." J Mol Biol 287: 527-38.
• Tuma, R., P. E. Prevelige, Jr., et al. (1998). "Mechanism of capsid maturation in a double-stranded DNA virus." Proc Natl Acad Sci U S A 95: 9885-90.
• Tuma, R., M. H. Parker, et al. (1998). "A helical coat protein recognition domain of the bacteriophage P22 scaffolding protein." J Mol Biol 281: 81-94.
• Tuma, R., P. E. Prevelige, Jr., et al. (1996). "Structural transitions in the scaffolding and coat proteins of P22 virus during assembly and disassembly." Biochemistry 35: 4619-27.